A B C D E G I J L M N P R S T U W

A

acceptDataSet(DataSetEvent) - Method in class weka.gui.beans.RScriptExecutor

Accept a data set and convert it into a data frame in R

acceptsInstances() - Method in class weka.gui.beans.JavaGDPerspective

Returns true - this panel pushes incoming instances into R as a data frame called "rdata"

acceptsInstances() - Method in class weka.gui.knowledgeflow.RConsolePerspective

We accept instances, and push them to R as a data frame called "rdata"

acceptTestSet(TestSetEvent) - Method in class weka.gui.beans.RScriptExecutor

Accept a test set and convert it into a data frame in R

acceptTrainingSet(TrainingSetEvent) - Method in class weka.gui.beans.RScriptExecutor

Accept a training set and convert it into a data frame in R

acquireSession(Object) - Static method in class weka.core.RSession

Acquire the session for the requester

acquireSession(Object) - Static method in class weka.core.RSessionImpl

Acquire the session for the requester

addDataSourceListener(DataSourceListener) - Method in class weka.gui.beans.RScriptExecutor

Add a data source listener

addImageListener(ImageListener) - Method in class weka.gui.beans.RScriptExecutor

Add an image listener

addListener(JavaGDListener) - Method in interface weka.core.JavaGDNotifier

Add a listener

addListener(JavaGDListener) - Method in class weka.core.JavaGDOffscreenRenderer

Add a listener

addTextListener(TextListener) - Method in class weka.gui.beans.RScriptExecutor

Add a text listener

assign(Object, String, REXP) - Method in class weka.core.RSession

Wraps REngine.assign

assign(Object, String, byte[]) - Method in class weka.core.RSession

Wraps REngine.assign

assign(Object, String, double[]) - Method in class weka.core.RSession

Wraps REngine.assign

assign(Object, String, int[]) - Method in class weka.core.RSession

Wraps REngine.assign

assign(Object, String, String[]) - Method in class weka.core.RSession

Wraps REngine.assign

assign(Object, String, REXP) - Method in interface weka.core.RSessionAPI

assign(Object, String, byte[]) - Method in interface weka.core.RSessionAPI

assign(Object, String, double[]) - Method in interface weka.core.RSessionAPI

assign(Object, String, int[]) - Method in interface weka.core.RSessionAPI

assign(Object, String, String[]) - Method in interface weka.core.RSessionAPI

assign(Object, String, REXP) - Method in class weka.core.RSessionImpl

Wraps REngine.assign

assign(Object, String, byte[]) - Method in class weka.core.RSessionImpl

Wraps REngine.assign

assign(Object, String, double[]) - Method in class weka.core.RSessionImpl

Wraps REngine.assign

assign(Object, String, int[]) - Method in class weka.core.RSessionImpl

Wraps REngine.assign

assign(Object, String, String[]) - Method in class weka.core.RSessionImpl

Wraps REngine.assign

B

batchSizeTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

batchSizeTipText() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the tip text for this property

buildClassifier(Instances) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Build the specified R learner on the incoming training data.

buildClassifier(Instances) - Method in class weka.classifiers.mlr.MLRClassifier

Build the specified R learner on the incoming training data.

C

clearConsoleBuffer(Object) - Method in class weka.core.RSession

Clear the contents of the R console buffer

clearConsoleBuffer(Object) - Method in interface weka.core.RSessionAPI

clearConsoleBuffer(Object) - Method in class weka.core.RSessionImpl

Clear the contents of the R console buffer

close() - Method in class weka.core.RSession

close() - Method in interface weka.core.RSessionAPI

close() - Method in class weka.core.RSessionImpl

closeREngine() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Close the R environment down.

closeREngine() - Method in class weka.classifiers.mlr.MLRClassifier

closingCancel() - Method in class weka.gui.beans.RScriptExecutorCustomizer

closingOK() - Method in class weka.gui.beans.RScriptExecutorCustomizer

connectionAllowed(EventSetDescriptor) - Method in class weka.gui.beans.RScriptExecutor

Returns true if, at this time, the object will accept a connection via the named event

connectionAllowed(String) - Method in class weka.gui.beans.RScriptExecutor

Returns true if a connection can be made to this step using the named connection type

connectionNotification(String, Object) - Method in class weka.gui.beans.RScriptExecutor

Notification of a particular connection made to us

createReference(Object, REXP) - Method in class weka.core.RSession

Pushes an REXP back into R and, if successful, returns a reference REXP that points to the pushed object in R.

createReference(Object, REXP) - Method in interface weka.core.RSessionAPI

createReference(Object, REXP) - Method in class weka.core.RSessionImpl

Pushes an REXP back into R and, if successful, returns a reference REXP that points to the pushed object in R.

D

dataFrameToInstances(REXP) - Static method in class weka.core.RUtils

Convert an R data frame to instances

debugTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

debugTipText() - Method in class weka.classifiers.mlr.MLRClassifier

disconnectionNotification(String, Object) - Method in class weka.gui.beans.RScriptExecutor

Notification of disconnection from us

distributionForInstance(Instance) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Calculates the class membership probabilities for the given test instance.

distributionForInstance(Instance) - Method in class weka.classifiers.mlr.MLRClassifier

Calculates the class membership probabilities for the given test instance.

distributionsForInstances(Instances) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Batch scoring method

distributionsForInstances(Instances) - Method in class weka.classifiers.mlr.MLRClassifier

Batch scoring method

dontReplaceMissingValuesTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

dontReplaceMissingValuesTipText() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the tip text for this property

dropSession(Object) - Method in interface weka.core.RSessionAPI

dropSession(Object) - Method in class weka.core.RSessionImpl

E

eventGeneratable(String) - Method in class weka.gui.beans.RScriptExecutor

Returns true if, at this time, the named event can be generated

ExplorerRConsolePanel - Class in weka.gui.explorer

Explorer plugin providing the r console and JavaGD graphics display.

ExplorerRConsolePanel() - Constructor for class weka.gui.explorer.ExplorerRConsolePanel

Construct a new ExplorerRConsolePanel

G

gdOpen(double, double) - Method in class weka.core.WekaJavaGD

get(Object, String) - Method in class weka.core.RSession

Get a named object from R.

get(Object, String) - Method in interface weka.core.RSessionAPI

get(Object, String) - Method in class weka.core.RSessionImpl

Get a named object from R.

getBatchSize() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Get the batch size for prediction (i.e.

getBatchSize() - Method in class weka.classifiers.mlr.MLRClassifier

Get the batch size for prediction (i.e.

getBeanDescriptor() - Method in class weka.gui.beans.RScriptExecutorBeanInfo

Get the bean descriptor for this bean

getCapabilities() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns default capabilities of the classifier.

getCapabilities() - Method in class weka.classifiers.mlr.MLRClassifier

Returns default capabilities of the classifier.

getConsoleBuffer(Object) - Method in class weka.core.RSession

Get the contents of the R console buffer

getConsoleBuffer(Object) - Method in interface weka.core.RSessionAPI

getConsoleBuffer(Object) - Method in class weka.core.RSessionImpl

Get the contents of the R console buffer

getCustomEditorForStep() - Method in class weka.knowledgeflow.steps.RScriptExecutor

getCustomName() - Method in class weka.gui.beans.RScriptExecutor

Get the custom (descriptive) name for this bean (if one has been set)

getDebug() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Get whether to output debugging info

getDebug() - Method in class weka.classifiers.mlr.MLRClassifier

Get whether to output debugging info

getDontReplaceMissingValues() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Get whether to turn off replacement of missing values in the data before it is passed into R.

getDontReplaceMissingValues() - Method in class weka.classifiers.mlr.MLRClassifier

Get whether to turn off replacement of missing values in the data before it is passed into R.

getEventSetDescriptors() - Method in class weka.gui.beans.RScriptExecutorBeanInfo

Get the event set descriptors for this bean

getExplorer() - Method in class weka.gui.explorer.ExplorerRConsolePanel

Returns null - this panel does not keep a reference to the Explorer

getIncomingConnectionTypes() - Method in class weka.knowledgeflow.steps.RScriptExecutor

getJavaGDNotifier() - Static method in class weka.core.JavaGDOffscreenRenderer

getLearnerParams() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Get the parameters for the R learner.

getLearnerParams() - Method in class weka.classifiers.mlr.MLRClassifier

Get the parameters for the R learner.

getLogMessagesFromR() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Get whether to log info/warning messages from R to the console.

getLogMessagesFromR() - Method in class weka.classifiers.mlr.MLRClassifier

Get whether to log info/warning messages from R to the console.

getOptions() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Gets the current settings of MLRClassifier.

getOptions() - Method in class weka.classifiers.mlr.MLRClassifier

Gets the current settings of MLRClassifier.

getOutgoingConnectionTypes() - Method in class weka.knowledgeflow.steps.RScriptExecutor

getPerspectiveIcon() - Method in class weka.gui.beans.JavaGDPerspective

Get the perspective's icon

getPerspectiveTipText() - Method in class weka.gui.beans.JavaGDPerspective

Get the perspective's tool tip

getPerspectiveTitle() - Method in class weka.gui.beans.JavaGDPerspective

Get the perspective's title

getRevision() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the revision string.

getRevision() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the revision string.

getRLearner() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Get the base R learner to use

getRLearner() - Method in class weka.classifiers.mlr.MLRClassifier

Get the base R learner to use

getRScript() - Method in class weka.gui.beans.RScriptExecutor

Get the script to execute

getRScript() - Method in class weka.knowledgeflow.steps.RScriptExecutor

Get the script to execute

getScriptFile() - Method in class weka.gui.beans.RScriptExecutor

Get the filename of the script to load at runtime

getScriptFile() - Method in class weka.knowledgeflow.steps.RScriptExecutor

Get the filename of the script to load at runtime

getSeed() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Gets the seed for the random number generations

getSeed() - Method in class weka.classifiers.mlr.MLRClassifier

Gets the seed for the random number generations

getSession(Object) - Method in interface weka.core.RSessionAPI

getSession(Object) - Method in class weka.core.RSessionImpl

getSessionSingleton() - Static method in class weka.core.RSessionImpl

Get the reference to the singleton.

getStartMessage() - Method in class weka.gui.beans.RScriptExecutor

Get the start message string (no longer used in Weka 3.7).

getTabTitle() - Method in class weka.gui.explorer.ExplorerRConsolePanel

Get the title for this tab

getTabTitleToolTip() - Method in class weka.gui.explorer.ExplorerRConsolePanel

Get the tool tip for this tab

getVisual() - Method in class weka.gui.beans.RScriptExecutor

Get the visual representation of this step

globalInfo() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Global info for this wrapper classifier.

globalInfo() - Method in class weka.classifiers.mlr.MLRClassifier

Global info for this wrapper classifier.

globalInfo() - Method in class weka.gui.beans.RScriptExecutor

Get about information to display in the GUI

I

imageGenerated(BufferedImage) - Method in interface weka.core.JavaGDListener

Called when a graphics image has been generated

imageGenerated(BufferedImage) - Method in class weka.gui.beans.JavaGDConsolePanel

Display an image and store in the history list.

imageGenerated(BufferedImage) - Method in class weka.gui.beans.RScriptExecutor

imageGenerated(BufferedImage) - Method in class weka.knowledgeflow.steps.RScriptExecutor

implementsMoreEfficientBatchPrediction() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns true, as R schemes have to predict in batches and we push entire test sets over into R

implementsMoreEfficientBatchPrediction() - Method in class weka.classifiers.mlr.MLRClassifier

Returns true, as R schemes have to predict in batches and we push entire test sets over into R

init() - Method in interface weka.core.RSessionAPI

init() - Method in class weka.core.RSessionImpl

Initialization routine.

installLibrary(Object, String) - Method in class weka.core.RSession

Convenience method for getting R to install a library.

installLibrary(Object, String, String) - Method in class weka.core.RSession

Convenience method for getting R to install a library.

installLibrary(Object, String) - Method in interface weka.core.RSessionAPI

installLibrary(Object, String, String) - Method in interface weka.core.RSessionAPI

installLibrary(Object, String) - Method in class weka.core.RSessionImpl

Convenience method for getting R to install a library.

installLibrary(Object, String, String) - Method in class weka.core.RSessionImpl

Convenience method for getting R to install a library.

instancesToDataFrame(RSession, Object, Instances, String) - Static method in class weka.core.RUtils

Transfer a set of instances into a R data frame in the workspace.

instantiationComplete() - Method in class weka.gui.knowledgeflow.RConsolePerspective

isBusy() - Method in class weka.gui.beans.RScriptExecutor

Returns true if.

isJriLoaded() - Static method in class weka.core.JRINativeLoader

This indicates if the library for communicating with R could be loaded at all.

isNativeLibraryLoaded() - Static method in class weka.core.JRILoader

Returns true if the native libraries were loaded successfully.

isVariableSet(Object, String) - Method in class weka.core.RSession

Check if a named variable is set in the R environment

isVariableSet(Object, String) - Method in interface weka.core.RSessionAPI

isVariableSet(Object, String) - Method in class weka.core.RSessionImpl

Check if a named variable is set in the R environment

J

javaGDAvailable() - Static method in class weka.core.JavaGDOffscreenRenderer

Returns true if the JavaGD graphics device is available

JavaGDConsolePanel - Class in weka.gui.beans

Implements a panel containing an area for displaying R graphics produced by the JavaGD graphics device and also a general R console for interactively evaluating R commands.

JavaGDConsolePanel() - Constructor for class weka.gui.beans.JavaGDConsolePanel

Construct a new JavaGDConsolePanel

JavaGDConsolePanel(boolean) - Constructor for class weka.gui.beans.JavaGDConsolePanel

Construct a new JavaGDConsolePanel

JavaGDListener - Interface in weka.core

Interface to something that is interested in graphics produced by R via the JavaGD graphics device.

JavaGDNotifier - Interface in weka.core

Interface to something that maintains a list of listeners that are interested in graphics produced from R via the JavaGD graphics device.

JavaGDOffscreenRenderer - Class in weka.core

A class that extends the JavaGD JGDPanel class to provide off-screen rendering (to BufferedImage) of graphics produced in R.

JavaGDPerspective - Class in weka.gui.beans

A KnowledgeFlow perspective providing the r console and R JavaGD graphics display.

JavaGDPerspective() - Constructor for class weka.gui.beans.JavaGDPerspective

Constructor

JRILoader - Class in weka.core

Class that makes sure that key JRI classes and the native library are all loaded by the root class loader.

JRILoader() - Constructor for class weka.core.JRILoader

JRINativeLoader - Class in weka.core

Takes care of loading the native JRI library.

JRINativeLoader() - Constructor for class weka.core.JRINativeLoader

L

learnerParamsTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

learnerParamsTipText() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the tip text for this property

listOptions() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns an enumeration describing the available options.

listOptions() - Method in class weka.classifiers.mlr.MLRClassifier

Returns an enumeration describing the available options.

load() - Static method in class weka.core.JRILoader

Inject byte code into the root class loader and make sure that the native libraries are loaded (just once) and all JRI classes are loaded by the root class loader

loadLibrary() - Static method in class weka.core.JRINativeLoader

This method will try to load a JRI library that is in the accessible library path.

loadLibrary(String) - Static method in class weka.core.JRINativeLoader

This method will try to load a JRI library that is addressed by libraryFile.

loadLibrary(File) - Static method in class weka.core.JRINativeLoader

This method will try to load a JRI library that is addressed by libraryFile.

loadLibrary(Object, String) - Method in class weka.core.RSession

Convenience method for getting R to load a named library.

loadLibrary(Object, String) - Method in interface weka.core.RSessionAPI

loadLibrary(Object, String) - Method in class weka.core.RSessionImpl

Convenience method for getting R to load a named library.

logMessage(String) - Method in interface weka.core.RLoggerAPI

logMessagesFromRTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

logMessagesFromRTipText() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the tip text for this property

M

main(String[]) - Static method in class weka.classifiers.mlr.MLRClassifier

Main method for testing this class.

MLRClassifier - Class in weka.classifiers.mlr

Wrapper classifier for the MLRClassifier package.

MLRClassifier() - Constructor for class weka.classifiers.mlr.MLRClassifier

MLRClassifierImpl - Class in weka.classifiers.mlr.impl

Implementation class for a wrapper classifier for the MLR R library:

http://cran.r-project.org/web/packages/mlr/

MLRClassifierImpl() - Constructor for class weka.classifiers.mlr.impl.MLRClassifierImpl

N

notifyListeners(JavaGDListener...) - Method in interface weka.core.JavaGDNotifier

Tell the notifier to notify the listeners of any cached graphics

notifyListeners(JavaGDListener...) - Method in class weka.core.JavaGDOffscreenRenderer

Notify the listeners of any cached graphics

P

paintToImage(int, int) - Method in class weka.core.JavaGDOffscreenRenderer

Paints the current display to a BufferedImage

parseAndEval(Object, String) - Method in class weka.core.RSession

Wraps REngine.parseAndEval.

parseAndEval(Object, String) - Method in interface weka.core.RSessionAPI

parseAndEval(Object, String) - Method in class weka.core.RSessionImpl

Wraps REngine.parseAndEval.

postExecution() - Method in class weka.classifiers.mlr.MLRClassifier

preExecution() - Method in class weka.classifiers.mlr.MLRClassifier

processIncoming(Data) - Method in class weka.knowledgeflow.steps.RScriptExecutor

PROPERTIES_FILE - Static variable in class weka.gui.beans.JavaGDConsolePanel

editor setup

PROPERTIES_FILE - Static variable in class weka.gui.beans.RScriptExecutorCustomizer

editor setup

PROPERTIES_FILE - Static variable in class weka.gui.knowledgeflow.steps.RScriptExecutorStepEditorDialog

editor setup

pushInstancesToR(Instances) - Method in class weka.gui.beans.JavaGDConsolePanel

Transfers an Instances object into R as a data frame called "rdata"

R

R_CLASSIF_ADA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_AVNNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_BDK - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_BINOMIAL - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_BLACKBOOST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_BOOSTING - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_BST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_C50 - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_CFOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_CLUSTERSVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_CTREE - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_CVGLMNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_DBNDNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_DCSVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_FNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_GATERSVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_GAUSSPR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_GBM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_GEODA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_GLMBOOST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_GLMNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_H2O_DEEPLEARNING - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_H2O_GBM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_H2O_GLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_H2O_RANDOMFOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_HDRDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_KKNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_KNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_KSVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LIBLINEARL1L2SVC - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LIBLINEARL1LOGREG - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LIBLINEARL2L1SVC - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LIBLINEARL2LOGREG - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LIBLINEARL2SVC - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LIBLINEARMULTICLASSSVC - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LINDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LOGREG - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LQA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LSSVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_LVQ1 - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_MDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_MLP - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_MULTINOM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_NAIVE_BAYES - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_NEURALNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_NNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_NNTRAIN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_NODEHARVEST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PAMR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PENALIZED_FUSEDLASSO - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PENALIZED_LASSO - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PENALIZED_RIDGE - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PLR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PLSDACARET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_PROBIT - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_QDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_QUADA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RANDOM_FOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RANDOM_FOREST_SRC - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RANDOM_FOREST_SRC_SYN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RANGER - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RFERNS - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RKNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_ROTATIONFOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RPART - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RRF - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_RRLDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_SAEDNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_SDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_SPARSELDA - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_SVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_XGBOOST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_CLASSIF_XYF - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_AVNNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BCART - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BDK - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BGP - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BGPLLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BLACKBOOST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BRNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BTGP - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BTGPLLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_BTLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_CFOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_CRS - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_CTREE - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_CUBIST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_EARTH - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_ELMNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_FNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_FRBS - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_GAUSSPR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_GBM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_GLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_GLMBOOST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_GLMNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_GPFIT - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_H2O_DEEPLEARNING - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_H2O_GBM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_H2O_GLM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_H2O_RANDOMFOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_KKNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_KM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_KSVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_LAGP - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_LIBLINEARL2L1SVR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_LIBLINEARL2L2SVR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_LM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_MARS - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_MOB - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_NNET - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_NODEHARVEST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_PCR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_PENALIZED_FUSEDLASSO - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_PENALIZED_LASSO - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_PENALIZED_RIDGE - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_PLSR - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RANDOM_FOREST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RANDOM_FOREST_SRC - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RANDOM_FOREST_SRC_SYN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RANGER - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RKNN - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RPART - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RRF - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RSM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_RVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_SLIM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_SVM - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_XGBOOST - Static variable in class weka.classifiers.mlr.MLRClassifier

R_REGR_XYF - Static variable in class weka.classifiers.mlr.MLRClassifier

rAvailable() - Static method in class weka.core.RSession

Returns true if the R environment has been loaded and is available to clients

rAvailable() - Static method in class weka.core.RSessionImpl

Checks if R is available

RConsolePerspective - Class in weka.gui.knowledgeflow

RConsolePerspective() - Constructor for class weka.gui.knowledgeflow.RConsolePerspective

Constructor

releaseSession(Object) - Static method in class weka.core.RSession

Release the session so that other clients can obtain it.

releaseSession(Object) - Static method in class weka.core.RSessionImpl

Release the session so that other clients can obtain it.

removeDataSourceListener(DataSourceListener) - Method in class weka.gui.beans.RScriptExecutor

Remove a data source listener

removeImageListener(ImageListener) - Method in class weka.gui.beans.RScriptExecutor

Remove an data image listener

removeListener(JavaGDListener) - Method in interface weka.core.JavaGDNotifier

Remove a listener

removeListener(JavaGDListener) - Method in class weka.core.JavaGDOffscreenRenderer

Remove a listener

removeTextListener(TextListener) - Method in class weka.gui.beans.RScriptExecutor

Remove a text listener

requiresLog() - Method in class weka.gui.knowledgeflow.RConsolePerspective

RFlushConsole(REngine) - Method in class weka.core.RSessionImpl

called by R to flush (display) any pending console output.

RLearnerTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

RLearnerTipText() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the tip text for this property

RLoggerAPI - Interface in weka.core

Interface to something that can map R console warnings/messages to Weka log messages

RScriptExecutor - Class in weka.gui.beans

A Knowledge Flow component that executes a user-supplied R script.

RScriptExecutor() - Constructor for class weka.gui.beans.RScriptExecutor

Constructor

RScriptExecutor - Class in weka.knowledgeflow.steps

A Knowledge Flow component that executes a user-supplied R script.

RScriptExecutor() - Constructor for class weka.knowledgeflow.steps.RScriptExecutor

RScriptExecutorBeanInfo - Class in weka.gui.beans

Bean info class for the RScriptExecutor

RScriptExecutorBeanInfo() - Constructor for class weka.gui.beans.RScriptExecutorBeanInfo

RScriptExecutorCustomizer - Class in weka.gui.beans

Customizer for the RScriptExecutor

RScriptExecutorCustomizer() - Constructor for class weka.gui.beans.RScriptExecutorCustomizer

RScriptExecutorStepEditorDialog - Class in weka.gui.knowledgeflow.steps

Editor dialog for the RScriptExecutor step

RScriptExecutorStepEditorDialog() - Constructor for class weka.gui.knowledgeflow.steps.RScriptExecutorStepEditorDialog

RSession - Class in weka.core

Maintains a proxy singleton interface to the actual RSession implementation.

RSession() - Constructor for class weka.core.RSession

RSessionAPI - Interface in weka.core

Interface to an RSession.

RSessionException - Exception in weka.core

Exception for R-related problems.

RSessionException(String) - Constructor for exception weka.core.RSessionException

RSessionImpl - Class in weka.core

Maintains a singleton object for managing R sessions.

RSessionImpl() - Constructor for class weka.core.RSessionImpl

RShowMessage(REngine, String) - Method in class weka.core.RSessionImpl

called when R wants to show a warning/error message box (not console-related).

RUtils - Class in weka.core

Static utility methods for pushing/pulling data to/from R.

RUtils() - Constructor for class weka.core.RUtils

RWriteConsole(REngine, String, int) - Method in class weka.core.RSessionImpl

called when R prints output to the console.

S

seedTipText() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the tip text for this property

seedTipText() - Method in class weka.classifiers.mlr.MLRClassifier

Returns the tip text for this property

setActive(boolean) - Method in class weka.gui.beans.JavaGDPerspective

Called when the perspective becomes the active one in the KnowledgeFlow

setBatchSize(String) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set the batch size for prediction (i.e.

setBatchSize(String) - Method in class weka.classifiers.mlr.MLRClassifier

Set the batch size for prediction (i.e.

setCustomName(String) - Method in class weka.gui.beans.RScriptExecutor

Set a custom (descriptive) name for this bean

setDebug(boolean) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set whether to output debugging info

setDebug(boolean) - Method in class weka.classifiers.mlr.MLRClassifier

Set whether to output debugging info

setDontReplaceMissingValues(boolean) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set whether to turn off replacement of missing values in the data before it is passed into R.

setDontReplaceMissingValues(boolean) - Method in class weka.classifiers.mlr.MLRClassifier

Set whether to turn off replacement of missing values in the data before it is passed into R.

setEnvironment(Environment) - Method in class weka.gui.beans.RScriptExecutor

Set environment variables to use

setEnvironment(Environment) - Method in class weka.gui.beans.RScriptExecutorCustomizer

setExplorer(Explorer) - Method in class weka.gui.explorer.ExplorerRConsolePanel

Set the parent Explorer - unused (this panel does not keep a reference to the Explorer)

setInstances(Instances) - Method in class weka.gui.beans.JavaGDPerspective

Set instances to use - not used by this perspective

setInstances(Instances) - Method in class weka.gui.explorer.ExplorerRConsolePanel

Set the working instances for the panel - unused

setInstances(Instances) - Method in class weka.gui.knowledgeflow.RConsolePerspective

Accept instances and push to R (as a data frame called "rdata")

setLearnerParams(String) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set the parameters for the R learner.

setLearnerParams(String) - Method in class weka.classifiers.mlr.MLRClassifier

Set the parameters for the R learner.

setLoaded(boolean) - Method in class weka.gui.beans.JavaGDPerspective

Called when the perspective is loaded

setLog(Object, RLoggerAPI) - Method in class weka.core.RSession

Set the logger to use

setLog(Object, RLoggerAPI) - Method in interface weka.core.RSessionAPI

setLog(Object, RLoggerAPI) - Method in class weka.core.RSessionImpl

Set the logger to use

setLog(Logger) - Method in class weka.gui.beans.RScriptExecutor

Set a logger

setLog(Logger) - Method in class weka.gui.explorer.ExplorerRConsolePanel

Set the log - unused by this panel

setLog(Logger) - Method in class weka.gui.knowledgeflow.RConsolePerspective

setLogger(Logger) - Method in class weka.gui.beans.JavaGDConsolePanel

Set the logger to use

setLogMessagesFromR(boolean) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set whether to log info/warning messages from R to the console.

setLogMessagesFromR(boolean) - Method in class weka.classifiers.mlr.MLRClassifier

Set whether to log info/warning messages from R to the console.

setMainKFPerspective(KnowledgeFlowApp.MainKFPerspective) - Method in class weka.gui.beans.JavaGDPerspective

Set a reference to the main KnowlegeFlow perspective

setModifiedListener(BeanCustomizer.ModifyListener) - Method in class weka.gui.beans.RScriptExecutorCustomizer

setObject(Object) - Method in class weka.gui.beans.RScriptExecutorCustomizer

Set the RScriptExecutor to edit

setOptions(String[]) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Parses a given list of options.

setOptions(String[]) - Method in class weka.classifiers.mlr.MLRClassifier

Parses a given list of options.

setParentWindow(Window) - Method in class weka.gui.beans.RScriptExecutorCustomizer

setRLearner(SelectedTag) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set the base R learner to use

setRLearner(SelectedTag) - Method in class weka.classifiers.mlr.MLRClassifier

Set the base R learner to use

setRScript(String) - Method in class weka.gui.beans.RScriptExecutor

Set the script to execute

setRScript(String) - Method in class weka.knowledgeflow.steps.RScriptExecutor

Set the script to execute

setScriptFile(String) - Method in class weka.gui.beans.RScriptExecutor

Set the filename containing the script to be loaded at runtime

setScriptFile(File) - Method in class weka.knowledgeflow.steps.RScriptExecutor

Set the filename containing the script to be loaded at runtime

setSeed(int) - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Set the seed for random number generation.

setSeed(int) - Method in class weka.classifiers.mlr.MLRClassifier

Set the seed for random number generation.

setStepToEdit(Step) - Method in class weka.gui.knowledgeflow.steps.RScriptExecutorStepEditorDialog

setVisual(BeanVisual) - Method in class weka.gui.beans.RScriptExecutor

Set the visual for this step

start() - Method in class weka.gui.beans.RScriptExecutor

Start this step executing.

start() - Method in class weka.knowledgeflow.steps.RScriptExecutor

statusMessage(String) - Method in interface weka.core.RLoggerAPI

stepInit() - Method in class weka.knowledgeflow.steps.RScriptExecutor

stop() - Method in class weka.gui.beans.RScriptExecutor

Stop any processing that the bean might be doing.

syncDisplay(boolean) - Method in class weka.core.JavaGDOffscreenRenderer

T

TAGS_LEARNER - Static variable in class weka.classifiers.mlr.MLRClassifier

Tags for the various types of learner

toString() - Method in class weka.classifiers.mlr.impl.MLRClassifierImpl

Returns the textual description of the R classifier.

toString() - Method in class weka.classifiers.mlr.MLRClassifier

U

useDefaultVisual() - Method in class weka.gui.beans.RScriptExecutor

Use the default icon for this step

W

weka.classifiers.mlr - package weka.classifiers.mlr

weka.classifiers.mlr.impl - package weka.classifiers.mlr.impl

weka.core - package weka.core

weka.gui.beans - package weka.gui.beans

weka.gui.explorer - package weka.gui.explorer

weka.gui.knowledgeflow - package weka.gui.knowledgeflow

weka.gui.knowledgeflow.steps - package weka.gui.knowledgeflow.steps

weka.knowledgeflow.steps - package weka.knowledgeflow.steps

WekaJavaGD - Class in weka.core

A hook into the JavaGD system.

WekaJavaGD() - Constructor for class weka.core.WekaJavaGD

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